HL_7BL2_077

3D structure

PDB id

7BL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

pre-50S-ObgE particle state 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GUAACUAUAAC

Length

11 nucleotides

Bulged bases

7BL2|1|A|A|1913

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7BL2_077 not in the Motif Atlas

Homologous match to HL_9DFE_046

Geometric discrepancy: 0.4145

The information below is about HL_9DFE_046

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_25847.2

Basepair signature

cWW-F-cSH-tHW-F-F-F

Number of instances in this motif group

3

Unit IDs

7BL2|1|A|G|1910
7BL2|1|A|U|1911
7BL2|1|A|A|1912
7BL2|1|A|A|1913
7BL2|1|A|C|1914
7BL2|1|A|U|1915
7BL2|1|A|A|1916
7BL2|1|A|U|1917
7BL2|1|A|A|1918
7BL2|1|A|A|1919
7BL2|1|A|C|1920

Current chains

Chain A

23S ribosomal RNA

Nearby chains