HL_7BL2_079
3D structure
- PDB id
- 7BL2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- pre-50S-ObgE particle state 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- ACCCCAUGCCGAACU
- Length
- 15 nucleotides
- Bulged bases
- 7BL2|1|B|C|35, 7BL2|1|B|C|36, 7BL2|1|B|G|41
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7BL2_079 not in the Motif Atlas
- Homologous match to HL_8OI5_068
- Geometric discrepancy: 0.3865
- The information below is about HL_8OI5_068
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_13971.1
- Basepair signature
- cWW-cWS-F-tSW-F-tSH-tSH-cWW-F-F
- Number of instances in this motif group
- 2
Unit IDs
7BL2|1|B|A|34
7BL2|1|B|C|35
7BL2|1|B|C|36
7BL2|1|B|C|37
7BL2|1|B|C|38
7BL2|1|B|A|39
7BL2|1|B|U|40
7BL2|1|B|G|41
7BL2|1|B|C|42
7BL2|1|B|C|43
7BL2|1|B|G|44
7BL2|1|B|A|45
7BL2|1|B|A|46
7BL2|1|B|C|47
7BL2|1|B|U|48
Current chains
- Chain B
- 5S ribosomal RNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain F
- 50S ribosomal protein L5
- Chain O
- 50S ribosomal protein L18
- Chain b
- 50S ribosomal protein L31
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