HL_7BL3_050

3D structure

PDB id

7BL3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

pre-50S-ObgE particle state 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUGAAGAUGC

Length

10 nucleotides

Bulged bases

7BL3|1|A|A|2030, 7BL3|1|A|A|2031, 7BL3|1|A|G|2032

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7BL3_050 not in the Motif Atlas

Homologous match to HL_4WF9_047

Geometric discrepancy: 0.1548

The information below is about HL_4WF9_047

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_78372.1

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

10

Unit IDs

7BL3|1|A|G|2027
7BL3|1|A|U|2028
7BL3|1|A|G|2029
7BL3|1|A|A|2030
7BL3|1|A|A|2031
7BL3|1|A|G|2032
7BL3|1|A|A|2033
7BL3|1|A|U|2034
7BL3|1|A|G|2035
7BL3|1|A|C|2036

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain D

50S ribosomal protein L3