HL_7BL3_061

3D structure

PDB id

7BL3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

pre-50S-ObgE particle state 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UGAAGUAG

Length

8 nucleotides

Bulged bases

7BL3|1|A|G|2529

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7BL3_061 not in the Motif Atlas

Homologous match to HL_4WF9_057

Geometric discrepancy: 0.2098

The information below is about HL_4WF9_057

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_31585.4

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

20

Unit IDs

7BL3|1|A|U|2528
7BL3|1|A|G|2529
7BL3|1|A|A|2530
7BL3|1|A|A|2531
7BL3|1|A|G|2532
7BL3|1|A|U|2533
7BL3|1|A|A|2534
7BL3|1|A|G|2535

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 9P

GTPase ObgE/CgtA

Chain G

50S ribosomal protein L6