HL_7BL5_004

3D structure

PDB id

7BL5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

pre-50S-ObgE particle

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UUUCGA

Length

6 nucleotides

Bulged bases

7BL5|1|A|U|138

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7BL5_004 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.3571

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

7BL5|1|A|U|137
7BL5|1|A|U|138
7BL5|1|A|U|139
7BL5|1|A|C|140
7BL5|1|A|G|141
7BL5|1|A|A|142

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain T

50S ribosomal protein L23