HL_7BOF_015

3D structure

PDB id

7BOF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state I (body domain)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

CGGUGAAAUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7BOF_015 not in the Motif Atlas

Homologous match to HL_5J7L_015

Geometric discrepancy: 0.1618

The information below is about HL_5J7L_015

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.5

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

7BOF|1|A|C|689
7BOF|1|A|G|690
7BOF|1|A|G|691
7BOF|1|A|U|692
7BOF|1|A|G|693
7BOF|1|A|A|694
7BOF|1|A|A|695
7BOF|1|A|A|696
7BOF|1|A|U|697
7BOF|1|A|G|698

Current chains

Chain A

16S rRNA

Nearby chains

Chain K

30S ribosomal protein S11