HL_7BOH_008

3D structure

PDB id

7BOH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complete Bacterial 30S ribosomal subunit assembly complex state E (+RbfA)(Consensus Refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

AACUGAGACACGGU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7BOH_008 not in the Motif Atlas

Homologous match to HL_5J7L_008

Geometric discrepancy: 0.07

The information below is about HL_5J7L_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.3

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

7BOH|1|A|A|320
7BOH|1|A|A|321
7BOH|1|A|C|322
7BOH|1|A|U|323
7BOH|1|A|G|324
7BOH|1|A|A|325
7BOH|1|A|G|326
7BOH|1|A|A|327
7BOH|1|A|C|328
7BOH|1|A|A|329
7BOH|1|A|C|330
7BOH|1|A|G|331
7BOH|1|A|G|332
7BOH|1|A|U|333

Current chains

Chain A

RNA (1527-MER)

Nearby chains

Chain P

30S ribosomal protein S16

Chain T

30S ribosomal protein S20