HL_7BOH_025

3D structure

PDB id

7BOH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complete Bacterial 30S ribosomal subunit assembly complex state E (+RbfA)(Consensus Refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

GUUAAGUC

Length

8 nucleotides

Bulged bases

7BOH|1|A|G|1094

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7BOH_025 not in the Motif Atlas

Homologous match to HL_4LFB_025

Geometric discrepancy: 0.0775

The information below is about HL_4LFB_025

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_77436.5

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

7BOH|1|A|G|1089
7BOH|1|A|U|1090
7BOH|1|A|U|1091
7BOH|1|A|A|1092
7BOH|1|A|A|1093
7BOH|1|A|G|1094
7BOH|1|A|U|1095
7BOH|1|A|C|1096

Current chains

Chain A

RNA (1527-MER)

Nearby chains

Chain B

30S ribosomal protein S2

Chain G

30S ribosomal protein S7