HL_7BOI_013
3D structure
- PDB id
- 7BOI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacterial 30S ribosomal subunit assembly complex state F (multibody refinement for body domain of 30S ribosome)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.98 Å
Loop
- Sequence
- GCAGCC(G7M)C
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: G7M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7BOI_013 not in the Motif Atlas
- Geometric match to HL_2ZZN_004
- Geometric discrepancy: 0.202
- The information below is about HL_2ZZN_004
- Detailed Annotation
- tRNA D-loop
- Broad Annotation
- No text annotation
- Motif group
- HL_64640.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
7BOI|1|A|G|521
7BOI|1|A|C|522
7BOI|1|A|A|523
7BOI|1|A|G|524
7BOI|1|A|C|525
7BOI|1|A|C|526
7BOI|1|A|G7M|527
7BOI|1|A|C|528
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain L
- 30S ribosomal protein S12
- Chain W
- Small ribosomal subunit biogenesis GTPase RsgA
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