HL_7BOI_018

3D structure

PDB id

7BOI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state F (multibody refinement for body domain of 30S ribosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.98 Å

Loop

Sequence

CCUUGAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7BOI_018 not in the Motif Atlas

Geometric match to HL_4V9F_016

Geometric discrepancy: 0.3769

The information below is about HL_4V9F_016

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

7BOI|1|A|C|840
7BOI|1|A|C|841
7BOI|1|A|U|842
7BOI|1|A|U|843
7BOI|1|A|G|844
7BOI|1|A|A|845
7BOI|1|A|G|846

Current chains

Chain A

16S rRNA

Nearby chains

Chain R

30S ribosomal protein S18