HL_7BT6_064

3D structure

PDB id

7BT6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.12 Angstroms resolution(state R1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.12 Å

Loop

Sequence

CUUG

Length

4 nucleotides

Bulged bases

7BT6|1|1|U|3195

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7BT6_064 not in the Motif Atlas

Geometric match to HL_4V88_192

Geometric discrepancy: 0.1567

The information below is about HL_4V88_192

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_43793.1

Basepair signature

cWW-F

Number of instances in this motif group

50

Unit IDs

7BT6|1|1|C|3194
7BT6|1|1|U|3195
7BT6|1|1|U|3196
7BT6|1|1|G|3197

Current chains

Chain 1

RDN25-1 rRNA

Nearby chains

Chain H

60S ribosomal protein L9-A

Chain M

60S ribosomal protein L14-A