HL_7BV8_016

3D structure

PDB id

7BV8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mature 50S ribosomal subunit from RrmJ knock out E.coli strain

Experimental method

ELECTRON MICROSCOPY

Resolution

3.14 Å

Loop

Sequence

GCUUAGGC

Length

8 nucleotides

Bulged bases

7BV8|1|A|U|546, 7BV8|1|A|G|548

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7BV8_016 not in the Motif Atlas

Homologous match to HL_7RQB_017

Geometric discrepancy: 0.2759

The information below is about HL_7RQB_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7BV8|1|A|G|543
7BV8|1|A|C|544
7BV8|1|A|U|545
7BV8|1|A|U|546
7BV8|1|A|A|547
7BV8|1|A|G|548
7BV8|1|A|G|549
7BV8|1|A|C|550

Current chains

Chain A

23S rRNA

Nearby chains

Chain K

50S ribosomal protein L13