HL_7CPU_014
3D structure
- PDB id
- 7CPU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 80S ribosome from mouse kidney
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- GACUGUCCCCAGU
- Length
- 13 nucleotides
- Bulged bases
- 7CPU|1|L5|G|1011, 7CPU|1|L5|U|1012, 7CPU|1|L5|C|1014, 7CPU|1|L5|C|1015
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7CPU|1|L5|G|1007
7CPU|1|L5|A|1008
7CPU|1|L5|C|1009
7CPU|1|L5|U|1010
7CPU|1|L5|G|1011
7CPU|1|L5|U|1012
7CPU|1|L5|C|1013
7CPU|1|L5|C|1014
7CPU|1|L5|C|1015
7CPU|1|L5|C|1016
7CPU|1|L5|A|1017
7CPU|1|L5|G|1018
7CPU|1|L5|U|1019
Current chains
- Chain L5
- Mus musculus 28S ribosomal RNA
Nearby chains
- Chain L7
- 5S ribosomal RNA; 5S rRNA
- Chain LD
- 60S ribosomal protein L5
- Chain LI
- 60S ribosomal protein L10
Coloring options: