HL_7CPU_029

3D structure

PDB id

7CPU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 80S ribosome from mouse kidney

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

GGUGGCCAUGGAAGUCGGAAUC

Length

22 nucleotides

Bulged bases

7CPU|1|L5|G|1776, 7CPU|1|L5|G|1784, 7CPU|1|L5|A|1787, 7CPU|1|L5|U|1795

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7CPU|1|L5|G|1775
7CPU|1|L5|G|1776
7CPU|1|L5|U|1777
7CPU|1|L5|G|1778
7CPU|1|L5|G|1779
7CPU|1|L5|C|1780
7CPU|1|L5|C|1781
7CPU|1|L5|A|1782
7CPU|1|L5|U|1783
7CPU|1|L5|G|1784
7CPU|1|L5|G|1785
7CPU|1|L5|A|1786
7CPU|1|L5|A|1787
7CPU|1|L5|G|1788
7CPU|1|L5|U|1789
7CPU|1|L5|C|1790
7CPU|1|L5|G|1791
7CPU|1|L5|G|1792
7CPU|1|L5|A|1793
7CPU|1|L5|A|1794
7CPU|1|L5|U|1795
7CPU|1|L5|C|1796

Current chains

Chain L5

Mus musculus 28S ribosomal RNA

Nearby chains