HL_7CPU_055

3D structure

PDB id

7CPU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 80S ribosome from mouse kidney

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

GACAUGCUCAUCGUU

Length

15 nucleotides

Bulged bases

7CPU|1|L5|C|3710, 7CPU|1|L5|C|3712, 7CPU|1|L5|G|3716

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7CPU|1|L5|G|3603
7CPU|1|L5|A|3604
7CPU|1|L5|C|3605
7CPU|1|L5|A|3606
7CPU|1|L5|U|3607
7CPU|1|L5|G|3608
7CPU|1|L5|C|3710
7CPU|1|L5|U|3711
7CPU|1|L5|C|3712
7CPU|1|L5|A|3713
7CPU|1|L5|U|3714
7CPU|1|L5|C|3715
7CPU|1|L5|G|3716
7CPU|1|L5|U|3717
7CPU|1|L5|U|3718

Current chains

Chain L5

Mus musculus 28S ribosomal RNA

Nearby chains

Chain Li

60S ribosomal protein L36

Chain SB

40S ribosomal protein S3a