HL_7CPU_108

3D structure

PDB id

7CPU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 80S ribosome from mouse kidney

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

CCCCGAGCG

Length

9 nucleotides

Bulged bases

7CPU|1|S2|C|1420, 7CPU|1|S2|C|1424

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7CPU|1|S2|C|1417
7CPU|1|S2|C|1418
7CPU|1|S2|C|1419
7CPU|1|S2|C|1420
7CPU|1|S2|G|1421
7CPU|1|S2|A|1422
7CPU|1|S2|G|1423
7CPU|1|S2|C|1424
7CPU|1|S2|G|1425

Current chains

Chain S2

Mus musculus 18S ribosomal RNA

Nearby chains

Chain SQ

40S ribosomal protein S16

Chain ST

40S ribosomal protein S19