HL_7D5S_020
3D structure
- PDB id
- 7D5S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 90S preribosome with inactive Utp24 (state A2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- AUAAGGAUUGACAUUCUUGAUUU
- Length
- 23 nucleotides
- Bulged bases
- 7D5S|1|SA|G|1228, 7D5S|1|SA|U|1257
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7D5S|1|SA|A|1224
7D5S|1|SA|U|1225
7D5S|1|SA|A|1226
7D5S|1|SA|A|1227
7D5S|1|SA|G|1228
7D5S|1|SA|G|1229
7D5S|1|SA|A|1230
7D5S|1|SA|U|1231
7D5S|1|SA|U|1232
7D5S|1|SA|G|1233
7D5S|1|SA|A|1234
7D5S|1|SA|C|1235
7D5S|1|SA|A|1236
7D5S|1|SA|U|1250
7D5S|1|SA|U|1251
7D5S|1|SA|C|1252
7D5S|1|SA|U|1253
7D5S|1|SA|U|1254
7D5S|1|SA|G|1255
7D5S|1|SA|A|1256
7D5S|1|SA|U|1257
7D5S|1|SA|U|1258
7D5S|1|SA|U|1259
Current chains
- Chain SA
- 18S rRNA
Nearby chains
- Chain RN
- Nucleolar complex protein 14
- Chain RS
- Essential nuclear protein 1
- Chain SN
- 40S ribosomal protein S12
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