HL_7D5T_001
3D structure
- PDB id
- 7D5T (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 90S preribosome with inactive Utp24 (state F1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6 Å
Loop
- Sequence
- UAUAAGCAAUUUAUACAGUGAAA
- Length
- 23 nucleotides
- Bulged bases
- 7D5T|1|SA|U|74, 7D5T|1|SA|U|75, 7D5T|1|SA|U|77
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7D5T|1|SA|U|64
7D5T|1|SA|A|65
7D5T|1|SA|U|66
7D5T|1|SA|A|67
7D5T|1|SA|A|68
7D5T|1|SA|G|69
7D5T|1|SA|C|70
7D5T|1|SA|A|71
7D5T|1|SA|A|72
7D5T|1|SA|U|73
7D5T|1|SA|U|74
7D5T|1|SA|U|75
7D5T|1|SA|A|76
7D5T|1|SA|U|77
7D5T|1|SA|A|78
7D5T|1|SA|C|79
7D5T|1|SA|A|80
7D5T|1|SA|G|81
7D5T|1|SA|U|82
7D5T|1|SA|G|83
7D5T|1|SA|A|84
7D5T|1|SA|A|85
7D5T|1|SA|A|86
Current chains
- Chain SA
- 18S rRNA
Nearby chains
- Chain RP
- U3 small nucleolar RNA-associated protein 20
- Chain SH
- 40S ribosomal protein S6-A
- Chain SZ
- 40S ribosomal protein S24-A
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