HL_7D63_015
3D structure
- PDB id
- 7D63 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 90S preribosome with inactive Utp24 (state C)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12.3 Å
Loop
- Sequence
- UAAUUCA
- Length
- 7 nucleotides
- Bulged bases
- 7D63|1|SA|A|452, 7D63|1|SA|U|454, 7D63|1|SA|C|455
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7D63_015 not in the Motif Atlas
- Geometric match to HL_4WF9_003
- Geometric discrepancy: 0.1495
- The information below is about HL_4WF9_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.6
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 21
Unit IDs
7D63|1|SA|U|450
7D63|1|SA|A|451
7D63|1|SA|A|452
7D63|1|SA|U|453
7D63|1|SA|U|454
7D63|1|SA|C|455
7D63|1|SA|A|456
Current chains
- Chain SA
- 18S rRNA
Nearby chains
- Chain RP
- U3 small nucleolar RNA-associated protein 20
- Chain SF
- 40S ribosomal protein S4-A
- Chain SZ
- 40S ribosomal protein S24-A
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