7D63 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
No loops found
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_7D63_001 | No text annotation | ||
| HL_7D63_002 | No text annotation | ||
| HL_7D63_003 | No text annotation | ||
| HL_7D63_004 | No text annotation | ||
| HL_7D63_005 | Mini UNCG | ||
| HL_7D63_006 | No text annotation | ||
| HL_7D63_007 | No text annotation | ||
| HL_7D63_008 | GNRA related | ||
| HL_7D63_009 | No text annotation | ||
| HL_7D63_010 | No text annotation | ||
| HL_7D63_011 | No text annotation | ||
| HL_7D63_012 | GNRA related | ||
| HL_7D63_013 | No text annotation | ||
| HL_7D63_014 | No text annotation | ||
| HL_7D63_015 | No text annotation | ||
| HL_7D63_016 | GNRA | ||
| HL_7D63_017 | No text annotation | ||
| HL_7D63_018 | No text annotation | ||
| HL_7D63_019 | Mini UNCG | ||
| HL_7D63_020 | No text annotation | ||
| HL_7D63_021 | No text annotation | ||
| HL_7D63_022 | GNRA | ||
| HL_7D63_023 | Mini UNCG | ||
| HL_7D63_024 | No text annotation | ||
| HL_7D63_025 | No text annotation | ||
| HL_7D63_026 | No text annotation | ||
| HL_7D63_027 | GNRA | ||
| HL_7D63_028 | No text annotation | ||
| HL_7D63_029 | Mini UNCG | ||
| HL_7D63_030 | Purine riboswitch | ||
| HL_7D63_033 | tRNA anticodon loop | ||
| HL_7D63_034 | GNRA | ||
| HL_7D63_031 | No text annotation | ||
| HL_7D63_032 | tRNA anticodon loop |
Valid loops
No loops found
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_7D63_001 | Single bulged G | ||
| IL_7D63_002 | No text annotation | ||
| IL_7D63_003 | No text annotation | ||
| IL_7D63_067 | No text annotation | ||
| IL_7D63_004 | No text annotation | ||
| IL_7D63_005 | No text annotation | ||
| IL_7D63_006 | No text annotation | ||
| IL_7D63_007 | Single bulged G | ||
| IL_7D63_008 | Isolated non-canonical cWW pair | ||
| IL_7D63_009 | No text annotation | ||
| IL_7D63_010 | Isolated non-canonical cWW pair | ||
| IL_7D63_011 | Single bulged U | ||
| IL_7D63_012 | Isolated non-canonical cWW contact | ||
| IL_7D63_013 | Single bulged C | ||
| IL_7D63_014 | No text annotation | ||
| IL_7D63_015 | No text annotation | ||
| IL_7D63_075 | No text annotation | ||
| IL_7D63_016 | Triple sheared related | ||
| IL_7D63_017 | Tandem non-canonical cWW pairs | ||
| IL_7D63_018 | Multiple bulged bases | ||
| IL_7D63_068 | Decoding loop related | ||
| IL_7D63_019 | No text annotation | ||
| IL_7D63_020 | tWH-tWH-tHW-tHW | ||
| IL_7D63_021 | Isolated cWH basepair | ||
| IL_7D63_022 | Major groove platform with extra cWW | ||
| IL_7D63_023 | Isolated non-canonical cWW pair | ||
| IL_7D63_024 | No text annotation | ||
| IL_7D63_025 | Single bulged A | ||
| IL_7D63_026 | No text annotation | ||
| IL_7D63_069 | No text annotation | ||
| IL_7D63_027 | Kink-turn with non-sequential stacking | ||
| IL_7D63_028 | No text annotation | ||
| IL_7D63_029 | Isolated cWH basepair | ||
| IL_7D63_030 | C-loop | ||
| IL_7D63_031 | Single bulged G | ||
| IL_7D63_032 | Single bulged A | ||
| IL_7D63_033 | No text annotation | ||
| IL_7D63_034 | Tandem non-canonical cWW pairs | ||
| IL_7D63_035 | No text annotation | ||
| IL_7D63_036 | No text annotation | ||
| IL_7D63_037 | Isolated non-canonical cWW pair | ||
| IL_7D63_038 | No text annotation | ||
| IL_7D63_039 | Single stack bend | ||
| IL_7D63_040 | Isolated non-canonical cWW pair | ||
| IL_7D63_041 | No text annotation | ||
| IL_7D63_042 | Major groove platform; stack outside cWW | ||
| IL_7D63_043 | Tandem non-canonical cWW pairs | ||
| IL_7D63_070 | Single bulged U | ||
| IL_7D63_071 | Isolated non-canonical cWW pair | ||
| IL_7D63_044 | Tandem non-canonical cWW pairs | ||
| IL_7D63_045 | Tandem non-canonical cWW pairs | ||
| IL_7D63_046 | Tandem non-canonical cWW pairs | ||
| IL_7D63_047 | Kink-turn related | ||
| IL_7D63_048 | Single bulged A | ||
| IL_7D63_049 | Tandem non-canonical cWW pairs | ||
| IL_7D63_050 | Tandem non-canonical cWW pairs | ||
| IL_7D63_051 | Single stack bend | ||
| IL_7D63_052 | C-loop | ||
| IL_7D63_053 | Single stack bend | ||
| IL_7D63_054 | Minor groove platform | ||
| IL_7D63_055 | No text annotation | ||
| IL_7D63_056 | No text annotation | ||
| IL_7D63_057 | Tandem non-canonical cWW pairs | ||
| IL_7D63_058 | No text annotation | ||
| IL_7D63_059 | Isolated non-canonical cWW pair | ||
| IL_7D63_076 | No text annotation | ||
| IL_7D63_060 | No text annotation | ||
| IL_7D63_072 | No text annotation | ||
| IL_7D63_061 | Tandem non-canonical cWW pairs | ||
| IL_7D63_073 | Isolated non-canonical cWW pair | ||
| IL_7D63_062 | Double sheared | ||
| IL_7D63_063 | Isolated non-canonical cWW pair | ||
| IL_7D63_074 | No text annotation | ||
| IL_7D63_064 | No text annotation | ||
| IL_7D63_065 | Isolated near basepair | ||
| IL_7D63_066 | No text annotation |
Valid loops
No loops found
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| J3_7D63_001 | No text annotation | ||
| J3_7D63_002 | No text annotation | ||
| J3_7D63_007 | No text annotation | ||
| J3_7D63_003 | No text annotation | ||
| J3_7D63_004 | No text annotation | ||
| J3_7D63_008 | No text annotation | ||
| J3_7D63_005 | No text annotation | ||
| J3_7D63_006 | No text annotation | ||
| J3_7D63_010 | No text annotation | ||
| J3_7D63_009 | No text annotation | ||
| J4_7D63_001 | No text annotation | ||
| J5_7D63_001 | No text annotation | ||
| J5_7D63_002 | No text annotation |
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