HL_7D63_020

3D structure

PDB id

7D63 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 90S preribosome with inactive Utp24 (state C)

Experimental method

ELECTRON MICROSCOPY

Resolution

12.3 Å

Loop

Sequence

UCUAUUUUCUA

Length

11 nucleotides

Bulged bases

7D63|1|SA|U|839

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7D63|1|SA|U|826
7D63|1|SA|C|827
7D63|1|SA|U|828
7D63|1|SA|A|829
7D63|1|SA|U|830
7D63|1|SA|U|839
7D63|1|SA|U|840
7D63|1|SA|U|841
7D63|1|SA|C|842
7D63|1|SA|U|843
7D63|1|SA|A|844

Current chains

Chain SA

18S rRNA

Nearby chains

Chain RP

U3 small nucleolar RNA-associated protein 20