HL_7D63_024

3D structure

PDB id

7D63 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 90S preribosome with inactive Utp24 (state C)

Experimental method

ELECTRON MICROSCOPY

Resolution

12.3 Å

Loop

Sequence

UGAAACUUAAA

Length

11 nucleotides

Bulged bases

7D63|1|SA|A|1133, 7D63|1|SA|U|1135

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7D63|1|SA|U|1129
7D63|1|SA|G|1130
7D63|1|SA|A|1131
7D63|1|SA|A|1132
7D63|1|SA|A|1133
7D63|1|SA|C|1134
7D63|1|SA|U|1135
7D63|1|SA|U|1136
7D63|1|SA|A|1137
7D63|1|SA|A|1138
7D63|1|SA|A|1139

Current chains

Chain SA

18S rRNA

Nearby chains

Chain B2

U3 small nucleolar RNA-associated protein 12

Chain RK

RNA 3'-terminal phosphate cyclase-like protein

Chain RN

Nucleolar complex protein 14