HL_7D63_025

3D structure

PDB id

7D63 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 90S preribosome with inactive Utp24 (state C)

Experimental method

ELECTRON MICROSCOPY

Resolution

12.3 Å

Loop

Sequence

AUAAGGAUUGACAUUCUUGAUUU

Length

23 nucleotides

Bulged bases

7D63|1|SA|G|1228, 7D63|1|SA|U|1257

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7D63|1|SA|A|1224
7D63|1|SA|U|1225
7D63|1|SA|A|1226
7D63|1|SA|A|1227
7D63|1|SA|G|1228
7D63|1|SA|G|1229
7D63|1|SA|A|1230
7D63|1|SA|U|1231
7D63|1|SA|U|1232
7D63|1|SA|G|1233
7D63|1|SA|A|1234
7D63|1|SA|C|1235
7D63|1|SA|A|1236
7D63|1|SA|U|1250
7D63|1|SA|U|1251
7D63|1|SA|C|1252
7D63|1|SA|U|1253
7D63|1|SA|U|1254
7D63|1|SA|G|1255
7D63|1|SA|A|1256
7D63|1|SA|U|1257
7D63|1|SA|U|1258
7D63|1|SA|U|1259

Current chains

Chain SA

18S rRNA

Nearby chains

Chain RN

Nucleolar complex protein 14

Chain RS

Essential nuclear protein 1