HL_7D63_033
3D structure
- PDB id
- 7D63 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 90S preribosome with inactive Utp24 (state C)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12.3 Å
Loop
- Sequence
- GGGCAACU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7D63_033 not in the Motif Atlas
- Geometric match to HL_3RG5_006
- Geometric discrepancy: 0.2521
- The information below is about HL_3RG5_006
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- tRNA anticodon loop
- Motif group
- HL_45359.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
7D63|1|SA|G|1697
7D63|1|SA|G|1698
7D63|1|SA|G|1699
7D63|1|SA|C|1700
7D63|1|SA|A|1701
7D63|1|SA|A|1702
7D63|1|SA|C|1703
7D63|1|SA|U|1704
Current chains
- Chain SA
- 18S rRNA
Nearby chains
- Chain RE
- U3 small nucleolar RNA-associated protein 22
Coloring options: