HL_7D6Z_036
3D structure
- PDB id
- 7D6Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GAAACAAC
- Length
- 8 nucleotides
- Bulged bases
- 7D6Z|1|A|A|983, 7D6Z|1|A|A|984
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7D6Z_036 not in the Motif Atlas
- Homologous match to HL_7A0S_027
- Geometric discrepancy: 0.1703
- The information below is about HL_7A0S_027
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_47171.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
7D6Z|1|A|G|978
7D6Z|1|A|A|979
7D6Z|1|A|A|980
7D6Z|1|A|A|981
7D6Z|1|A|C|982
7D6Z|1|A|A|983
7D6Z|1|A|A|984
7D6Z|1|A|C|985
Current chains
- Chain A
- 23S ribosomal rRNA
Nearby chains
- Chain Q
- 50S ribosomal protein L20
- Chain R
- 50S ribosomal protein L21
- Chain T
- 50S ribosomal protein L30
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