HL_7D6Z_101
3D structure
- PDB id
- 7D6Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GAUGCAACGC
- Length
- 10 nucleotides
- Bulged bases
- 7D6Z|1|f|G|971
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7D6Z_101 not in the Motif Atlas
- Homologous match to HL_5J7L_021
- Geometric discrepancy: 0.1324
- The information below is about HL_5J7L_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50779.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7D6Z|1|f|G|963
7D6Z|1|f|A|964
7D6Z|1|f|U|965
7D6Z|1|f|G|966
7D6Z|1|f|C|967
7D6Z|1|f|A|968
7D6Z|1|f|A|969
7D6Z|1|f|C|970
7D6Z|1|f|G|971
7D6Z|1|f|C|972
Current chains
- Chain f
- 16S ribosomal rRNA
Nearby chains
- Chain 3
- Transfer RNA; tRNA
- Chain 4
- Transfer RNA; tRNA
- Chain p
- 30S ribosomal protein S9
- Chain q
- 30S ribosomal protein S10
- Chain t
- 30S ribosomal protein S13
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