HL_7D80_077
3D structure
- PDB id
- 7D80 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- AACUGAGACACGGU
- Length
- 14 nucleotides
- Bulged bases
- 7D80|1|B|C|330, 7D80|1|B|G|331
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7D80_077 not in the Motif Atlas
- Homologous match to HL_6CZR_079
- Geometric discrepancy: 0.1829
- The information below is about HL_6CZR_079
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81205.2
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
7D80|1|B|A|320
7D80|1|B|A|321
7D80|1|B|C|322
7D80|1|B|U|323
7D80|1|B|G|324
7D80|1|B|A|325
7D80|1|B|G|326
7D80|1|B|A|327
7D80|1|B|C|328
7D80|1|B|A|329
7D80|1|B|C|330
7D80|1|B|G|331
7D80|1|B|G|332
7D80|1|B|U|333
Current chains
- Chain B
- 16S ribosomal RNA
Nearby chains
- Chain Q
- 30S ribosomal protein S16
- Chain U
- 30S ribosomal protein S20
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