HL_7D80_081

3D structure

PDB id

7D80 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

GAAGGGAGUAAAGUUAAUACCUUUGCUCAUUGAC

Length

34 nucleotides

Bulged bases

7D80|1|B|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7D80|1|B|G|450
7D80|1|B|A|451
7D80|1|B|A|452
7D80|1|B|G|453
7D80|1|B|G|454
7D80|1|B|G|455
7D80|1|B|A|456
7D80|1|B|G|457
7D80|1|B|U|458
7D80|1|B|A|459
7D80|1|B|A|460
7D80|1|B|A|461
7D80|1|B|G|462
7D80|1|B|U|463
7D80|1|B|U|464
7D80|1|B|A|465
7D80|1|B|A|466
7D80|1|B|U|467
7D80|1|B|A|468
7D80|1|B|C|469
7D80|1|B|C|470
7D80|1|B|U|471
7D80|1|B|U|472
7D80|1|B|U|473
7D80|1|B|G|474
7D80|1|B|C|475
7D80|1|B|U|476
7D80|1|B|C|477
7D80|1|B|A|478
7D80|1|B|U|479
7D80|1|B|U|480
7D80|1|B|G|481
7D80|1|B|A|482
7D80|1|B|C|483

Current chains

Chain B

16S ribosomal RNA

Nearby chains

Chain Q

30S ribosomal protein S16