HL_7D80_102
3D structure
- PDB id
- 7D80 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- CCCUACAGG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7D80_102 not in the Motif Atlas
- Homologous match to HL_2BTE_002
- Geometric discrepancy: 0.5838
- The information below is about HL_2BTE_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7D80|1|X|C|30
7D80|1|X|C|31
7D80|1|X|C|32
7D80|1|X|U|33
7D80|1|X|A|35
7D80|1|X|C|36
7D80|1|X|A|38
7D80|1|X|G|39
7D80|1|X|G|40
Current chains
- Chain X
- E-site tRNA
Nearby chains
- Chain B
- Small subunit ribosomal RNA; SSU rRNA
- Chain H
- 30S ribosomal protein S7
- Chain L
- 30S ribosomal protein S11
- Chain y
- Transfer RNA; tRNA
Coloring options: