HL_7D80_114

3D structure

PDB id

7D80 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

GGUGACAGCCC

Length

11 nucleotides

Bulged bases

7D80|1|A|G|329, 7D80|1|A|A|330, 7D80|1|A|C|331

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7D80|1|A|G|326
7D80|1|A|G|327
7D80|1|A|U|328
7D80|1|A|G|329
7D80|1|A|A|330
7D80|1|A|C|331
7D80|1|A|A|332
7D80|1|A|G|333
7D80|1|A|C|334
7D80|1|A|C|335
7D80|1|A|C|336

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain d

50S ribosomal protein L4

Chain s

50S ribosomal protein L24