HL_7D80_117

3D structure

PDB id

7D80 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

CGAGGCCGAAAGGCGUAG

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7D80|1|A|C|1357
7D80|1|A|G|1358
7D80|1|A|A|1359
7D80|1|A|G|1360
7D80|1|A|G|1361
7D80|1|A|C|1362
7D80|1|A|C|1363
7D80|1|A|G|1364
7D80|1|A|A|1365
7D80|1|A|A|1366
7D80|1|A|A|1367
7D80|1|A|G|1368
7D80|1|A|G|1369
7D80|1|A|C|1370
7D80|1|A|G|1371
7D80|1|A|U|1372
7D80|1|A|A|1373
7D80|1|A|G|1374

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 0

50S ribosomal protein L34

Chain b

50S ribosomal protein L2

Chain v

50S ribosomal protein L28