HL_7DCO_002
3D structure
- PDB id
- 7DCO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the activated spliceosome (Bact complex) at an atomic resolution of 2.5 angstrom
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- GCCUUUUAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7DCO|1|B|G|93
7DCO|1|B|C|94
7DCO|1|B|C|95
7DCO|1|B|U|96
7DCO|1|B|U|97
7DCO|1|B|U|98
7DCO|1|B|U|99
7DCO|1|B|A|100
7DCO|1|B|C|101
Current chains
- Chain B
- U5 snRNA
Nearby chains
- Chain A
- PRP8 isoform 1
- Chain F
- U6 spliceosomal RNA; U6 snRNA
- Chain G
- pre-mRNA
- Chain S
- Pre-mRNA-splicing factor CWC15
- Chain U
- Pre-mRNA-splicing factor CWC21
- Chain v
- PRP11 isoform 1
Coloring options: