RNA 3D Hub //

7DCO Hairpin, Internal, and multi-helix Junction Loop Motifs

Download loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_7DCO_0021/B/93:101No text annotation
HL_7DCO_0051/F/70:76GNRA
homologous
HL_6ASO_001
HL_34789.4
HL_7DCO_0081/H/54:61No text annotation

Problematic loops

#loop idProblemSequence
HL_7DCO_001No text annotation
HL_7DCO_003No text annotation
HL_7DCO_004No text annotation
HL_7DCO_006No text annotation
HL_7DCO_007No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_7DCO_0041/B/32:34,
1/B/120:121		No text annotation
IL_7DCO_0051/B/80:84,
1/B/110:112		No text annotation
IL_7DCO_0061/B/91:93,
1/B/101:103		No text annotation
IL_7DCO_0151/F/58:59,
1/H/23:26		No text annotation
IL_7DCO_0071/F/65:67,
1/F/81:82		No text annotation
IL_7DCO_0081/F/67:68,
1/F/78:81		Multiple bulged bases
geometric
IL_7RQB_098
NA
IL_7DCO_0091/G/491:493,
1/H/42:43		Single stack bend
geometric
IL_4C7O_002
IL_15011.3
IL_7DCO_0101/G/500:502,
1/H/34:35		No text annotation
geometric
IL_8B0X_048
IL_14190.2

Problematic loops

#loop idProblemSequence
IL_7DCO_001No text annotation
IL_7DCO_017No text annotation
IL_7DCO_002No text annotation
IL_7DCO_014No text annotation
IL_7DCO_003No text annotation
IL_7DCO_011No text annotation
IL_7DCO_012No text annotation
IL_7DCO_016No text annotation
IL_7DCO_018No text annotation
IL_7DCO_013No text annotation
IL_7DCO_019No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_7DCO_0031/B/25:28,
1/B/125:132,
1/B/145:146		No text annotation
J3_7DCO_0021/B/40:46,
1/B/69:79,
1/B/113:114		No text annotation
J3_7DCO_0051/F/61:64,
1/F/83:93,
1/H/12:21		No text annotation

Problematic loops

#loop idProblemSequence
J3_7DCO_001No text annotation
J3_7DCO_004No text annotation

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