HL_7ELP_002

3D structure

PDB id

7ELP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of xanthine riboswitch with xanthine, iridium hexammine soak

Experimental method

X-RAY DIFFRACTION

Resolution

2.79 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ELP_002 not in the Motif Atlas

Homologous match to HL_7ELQ_001

Geometric discrepancy: 0.1219

The information below is about HL_7ELQ_001

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7ELP|1|B|C|22||||1_657
7ELP|1|B|G|23||||1_657
7ELP|1|B|A|24||||1_657
7ELP|1|B|A|25||||1_657
7ELP|1|B|A|26||||1_657
7ELP|1|B|G|27||||1_657

Current chains

Chain B

NMT1_Ir(46-MER)

Nearby chains

Chain A

NMT1 RNA