HL_7F0D_023

3D structure

PDB id

7F0D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Mycobacterium tuberculosis 50S ribosome subunit bound with clarithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GGUAAGAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7F0D_023 not in the Motif Atlas

Geometric match to HL_5J7L_151

Geometric discrepancy: 0.3915

The information below is about HL_5J7L_151

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_80922.2

Basepair signature

cWW-tSH-F

Number of instances in this motif group

3

Unit IDs

7F0D|1|A|G|841
7F0D|1|A|G|842
7F0D|1|A|U|843
7F0D|1|A|A|844
7F0D|1|A|A|845
7F0D|1|A|G|846
7F0D|1|A|A|847
7F0D|1|A|C|848

Current chains

Chain A

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2