HL_7F36_007

3D structure

PDB id

7F36 (explore in PDB, NAKB, or RNA 3D Hub)

Description

TacT complexed with acetyl-glycyl-tRNAGly

Experimental method

X-RAY DIFFRACTION

Resolution

3.098 Å

Loop

Sequence

CAGUUGGUAG

Length

10 nucleotides

Bulged bases

7F36|1|G|U|16, 7F36|1|G|U|17, 7F36|1|G|G|18, 7F36|1|G|G|19, 7F36|1|G|U|20

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7F36_007 not in the Motif Atlas

Homologous match to HL_7EQJ_004

Geometric discrepancy: 0.1178

The information below is about HL_7EQJ_004

Detailed Annotation

tRNA D-loop

Broad Annotation

No text annotation

Motif group

HL_20490.1

Basepair signature

cWW-cWS-F

Number of instances in this motif group

13

Unit IDs

7F36|1|G|C|13
7F36|1|G|A|14
7F36|1|G|G|15
7F36|1|G|U|16
7F36|1|G|U|17
7F36|1|G|G|18
7F36|1|G|G|19
7F36|1|G|U|20
7F36|1|G|A|21
7F36|1|G|G|22

Current chains

Chain G

RNA (76-MER)

Nearby chains

Chain F

Transfer RNA; tRNA