7F36 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_7F36_001 | 1/E/13:22 | tRNA D-loop | homologous HL_7EQJ_004 HL_20490.1 | |
| HL_7F36_003 | 1/E/53:61 | T-loop with 2 stacked bulged bases | homologous HL_6JXM_003 HL_33597.3 | |
| HL_7F36_004 | 1/F/13:22 | tRNA D-loop | homologous HL_7UQ6_001 HL_20490.1 | |
| HL_7F36_005 | 1/F/32:38 | No text annotation | ||
| HL_7F36_006 | 1/F/53:61 | T-loop with 2 stacked bulged bases | homologous HL_4YCO_003 HL_33597.3 | |
| HL_7F36_007 | 1/G/13:22 | tRNA D-loop | homologous HL_7EQJ_004 HL_20490.1 | |
| HL_7F36_008 | 1/G/31:39 | No text annotation | homologous HL_6PMO_004 NA | |
| HL_7F36_009 | 1/G/53:61 | T-loop with 2 stacked bulged bases | homologous HL_4RDX_003 HL_33597.3 | |
| HL_7F36_010 | 1/H/13:22 | No text annotation | homologous HL_4LCK_001 NA | |
| HL_7F36_012 | 1/H/53:61 | T-loop with 2 stacked bulged bases | homologous HL_7LYF_003 HL_33597.3 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_7F36_002 | No text annotation | ||
| HL_7F36_011 | No text annotation |
Valid loops
No loops found
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J4_7F36_001 | 1/E/7:10, 1/E/25:27, 1/E/43:49, 1/E/65:66 | tRNA junction | homologous J4_7MRL_001 J4_95067.1 | |
| J4_7F36_002 | 1/F/7:10, 1/F/25:27, 1/F/43:49, 1/F/65:66 | tRNA junction | homologous J4_4RDX_003 J4_95067.1 | |
| J4_7F36_003 | 1/G/7:10, 1/G/25:27, 1/G/43:49, 1/G/65:66 | tRNA junction | homologous J4_3WQY_001 J4_95067.1 | |
| J4_7F36_004 | 1/H/7:10, 1/H/25:27, 1/H/43:49, 1/H/65:66 | tRNA junction | homologous J4_1QU2_001 J4_95067.1 |
Problematic loops
No problematic loops
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