3D structure

PDB id
7F5S (explore in PDB, NAKB, or RNA 3D Hub)
Description
human delta-METTL18 60S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.72 Å

Loop

Sequence
UAAGCAUA
Length
8 nucleotides
Bulged bases
7F5S|1|L5|A|39
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7F5S_001 not in the Motif Atlas
Geometric match to HL_5TBW_001
Geometric discrepancy: 0.0944
The information below is about HL_5TBW_001
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_36430.1
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
15

Unit IDs

7F5S|1|L5|U|37
7F5S|1|L5|A|38
7F5S|1|L5|A|39
7F5S|1|L5|G|40
7F5S|1|L5|C|41
7F5S|1|L5|A|42
7F5S|1|L5|U|43
7F5S|1|L5|A|44

Current chains

Chain L5
28S rRNA

Nearby chains

Chain LL
60S ribosomal protein L13
Chain LN
60S ribosomal protein L15
Chain La
60S ribosomal protein L27a
Chain Lo
60S ribosomal protein L36a

Coloring options:


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