HL_7F5S_004

3D structure

PDB id

7F5S (explore in PDB, NAKB, or RNA 3D Hub)

Description

human delta-METTL18 60S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

CGCGGCGG

Length

8 nucleotides

Bulged bases

7F5S|1|L5|G|135

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7F5S_004 not in the Motif Atlas

Homologous match to HL_8P9A_116

Geometric discrepancy: 0.5721

The information below is about HL_8P9A_116

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32346.5

Basepair signature

cWW-F

Number of instances in this motif group

10

Unit IDs

7F5S|1|L5|C|131
7F5S|1|L5|G|132
7F5S|1|L5|C|133
7F5S|1|L5|G|134
7F5S|1|L5|G|135
7F5S|1|L5|C|136
7F5S|1|L5|G|137
7F5S|1|L5|G|138

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LN

60S ribosomal protein L15

Chain Lh

60S ribosomal protein L35

Chain Lj

60S ribosomal protein L37