HL_7F5S_012

3D structure

PDB id

7F5S (explore in PDB, NAKB, or RNA 3D Hub)

Description

human delta-METTL18 60S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

CCGCGCGG

Length

8 nucleotides

Bulged bases

7F5S|1|L5|G|642

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7F5S_012 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.262

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81100.2

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

7F5S|1|L5|C|516
7F5S|1|L5|C|517
7F5S|1|L5|G|518
7F5S|1|L5|C|519
7F5S|1|L5|G|642
7F5S|1|L5|C|643
7F5S|1|L5|G|644
7F5S|1|L5|G|645

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LL

60S ribosomal protein L13