HL_7JJU_002
3D structure
- PDB id
- 7JJU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of en exoribonuclease-resistant RNA (xrRNA) from Potato leafroll virus (PLRV)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- CAUACACGAGUUGCAAG
- Length
- 17 nucleotides
- Bulged bases
- 7JJU|1|B|A|15, 7JJU|1|B|U|16
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_32704.1
- Basepair signature
- cWW-F-tWH-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
7JJU|1|B|C|14
7JJU|1|B|A|15
7JJU|1|B|U|16
7JJU|1|B|A|17
7JJU|1|B|C|18
7JJU|1|B|A|19
7JJU|1|B|C|20
7JJU|1|B|G|21
7JJU|1|B|A|22
7JJU|1|B|G|23
7JJU|1|B|U|24
7JJU|1|B|U|25
7JJU|1|B|G|26
7JJU|1|B|C|27
7JJU|1|B|A|28
7JJU|1|B|A|29
7JJU|1|B|G|30
Current chains
- Chain B
- Potato leafroll virus xrRNA
Nearby chains
- Chain A
- Potato leading responsible virus exoribonuclease-resistant RNA; PLRV_xrRNA
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