HL_7JQB_018

3D structure

PDB id

7JQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

SARS-CoV-2 Nsp1 and rabbit 40S ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UAUUUUGUUGGUUUUCG

Length

17 nucleotides

Bulged bases

7JQB|1|A|G|891

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7JQB|1|A|U|885
7JQB|1|A|A|886
7JQB|1|A|U|887
7JQB|1|A|U|888
7JQB|1|A|U|889
7JQB|1|A|U|890
7JQB|1|A|G|891
7JQB|1|A|U|892
7JQB|1|A|U|893
7JQB|1|A|G|894
7JQB|1|A|G|895
7JQB|1|A|U|896
7JQB|1|A|U|897
7JQB|1|A|U|898
7JQB|1|A|U|899
7JQB|1|A|C|900
7JQB|1|A|G|901

Current chains

Chain A

rRNA

Nearby chains

Chain H

eS6

Chain O

uS17