HL_7JQL_147

3D structure

PDB id

7JQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-001, mRNA, and deacylated P-site tRNA at 3.00A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GCAAGAGC

Length

8 nucleotides

Bulged bases

7JQL|1|2A|A|1634

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7JQL_147 not in the Motif Atlas

Homologous match to HL_7A0S_041

Geometric discrepancy: 0.2877

The information below is about HL_7A0S_041

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_07145.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

7JQL|1|2A|G|1630
7JQL|1|2A|C|1631
7JQL|1|2A|A|1631|||A
7JQL|1|2A|A|1632
7JQL|1|2A|G|1633
7JQL|1|2A|A|1634
7JQL|1|2A|G|1635
7JQL|1|2A|C|1636

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains