HL_7JSW_040
3D structure
- PDB id
- 7JSW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-III)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- UAGAGAAUA
- Length
- 9 nucleotides
- Bulged bases
- 7JSW|1|1|A|1634
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7JSW_040 not in the Motif Atlas
- Homologous match to HL_4WF9_039
- Geometric discrepancy: 0.2831
- The information below is about HL_4WF9_039
- Detailed Annotation
- GNRA with extra cWW
- Broad Annotation
- GNRA with extra cWW
- Motif group
- HL_20167.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
7JSW|1|1|U|1629
7JSW|1|1|A|1630
7JSW|1|1|G|1631
7JSW|1|1|A|1632
7JSW|1|1|G|1633
7JSW|1|1|A|1634
7JSW|1|1|A|1635
7JSW|1|1|U|1636
7JSW|1|1|A|1637
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: