HL_7JT2_108

3D structure

PDB id

7JT2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome stalled on long mRNA with ArfB bound in the A site

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CCUUCGGG

Length

8 nucleotides

Bulged bases

7JT2|1|3|U|209, 7JT2|1|3|C|210

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7JT2_108 not in the Motif Atlas

Homologous match to HL_6CZR_076

Geometric discrepancy: 0.4194

The information below is about HL_6CZR_076

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34168.3

Basepair signature

cWW-cWW-F

Number of instances in this motif group

11

Unit IDs

7JT2|1|3|C|206
7JT2|1|3|C|207
7JT2|1|3|U|208
7JT2|1|3|U|209
7JT2|1|3|C|210
7JT2|1|3|G|211
7JT2|1|3|G|212
7JT2|1|3|G|213

Current chains

Chain 3

16S ribosomal RNA

Nearby chains