HL_7JT3_104
3D structure
- PDB id
- 7JT3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rotated 70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound in the A site (+9-IV)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GUUCAAAUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7JT3_104 not in the Motif Atlas
- Homologous match to HL_1U0B_003
- Geometric discrepancy: 0.2443
- The information below is about HL_1U0B_003
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_28252.9
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 141
Unit IDs
7JT3|1|5|G|53
7JT3|1|5|U|54
7JT3|1|5|U|55
7JT3|1|5|C|56
7JT3|1|5|A|57
7JT3|1|5|A|58
7JT3|1|5|A|59
7JT3|1|5|U|60
7JT3|1|5|C|61
Current chains
- Chain 5
- tRNAfMet
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain a
- 50S ribosomal protein L1
Coloring options: