3D structure

PDB id
7K50 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pre-translocation non-frameshifting(CCA-A) complex (Structure I)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
GUUAAUACC
Length
9 nucleotides
Bulged bases
7K50|1|3|U|467
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7K50_082 not in the Motif Atlas
Homologous match to HL_5J7L_012
Geometric discrepancy: 0.3243
The information below is about HL_5J7L_012
Detailed Annotation
GNRA related
Broad Annotation
GNRA related
Motif group
HL_81538.2
Basepair signature
cWW-tSH-F-F-F-F
Number of instances in this motif group
16

Unit IDs

7K50|1|3|G|462
7K50|1|3|U|463
7K50|1|3|U|464
7K50|1|3|A|465
7K50|1|3|A|466
7K50|1|3|U|467
7K50|1|3|A|468
7K50|1|3|C|469
7K50|1|3|C|470

Current chains

Chain 3
16S ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:


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