HL_7K50_082

3D structure

PDB id

7K50 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation non-frameshifting(CCA-A) complex (Structure I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

7K50|1|3|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7K50_082 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.3243

The information below is about HL_5J7L_012

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7K50|1|3|G|462
7K50|1|3|U|463
7K50|1|3|U|464
7K50|1|3|A|465
7K50|1|3|A|466
7K50|1|3|U|467
7K50|1|3|A|468
7K50|1|3|C|469
7K50|1|3|C|470

Current chains

Chain 3

16S ribosomal RNA

Nearby chains