3D structure

PDB id
7K50 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pre-translocation non-frameshifting(CCA-A) complex (Structure I)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
GUUUGGGAC
Length
9 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7K50_110 not in the Motif Atlas
Homologous match to HL_5IBB_210
Geometric discrepancy: 0.1532
The information below is about HL_5IBB_210
Detailed Annotation
tRNA anticodon loop
Broad Annotation
Anticodon loop
Motif group
HL_36427.1
Basepair signature
cWW-F-F-F-F-F-F-F
Number of instances in this motif group
37

Unit IDs

7K50|1|7|G|31
7K50|1|7|U|32
7K50|1|7|U|33
7K50|1|7|U|34
7K50|1|7|G|35
7K50|1|7|G|36
7K50|1|7|G|37
7K50|1|7|A|38
7K50|1|7|C|39

Current chains

Chain 7
tRNAPro

Nearby chains

Chain 1
Large subunit ribosomal RNA; LSU rRNA
Chain 3
Small subunit ribosomal RNA; SSU rRNA
Chain 4
mRNA

Coloring options:


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