HL_7K51_029

3D structure

PDB id

7K51 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mid-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GCUUAUGC

Length

8 nucleotides

Bulged bases

7K51|1|1|A|1175

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7K51_029 not in the Motif Atlas

Geometric match to HL_4V88_198

Geometric discrepancy: 0.3736

The information below is about HL_4V88_198

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7K51|1|1|G|1171
7K51|1|1|C|1172
7K51|1|1|U|1173
7K51|1|1|U|1174
7K51|1|1|A|1175
7K51|1|1|U|1176
7K51|1|1|G|1177
7K51|1|1|C|1178

Current chains

Chain 1

23S ribosomal RNA

Nearby chains