HL_7K52_107
3D structure
- PDB id
- 7K52 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GCUCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7K52_107 not in the Motif Atlas
- Homologous match to HL_6ORD_036
- Geometric discrepancy: 0.3415
- The information below is about HL_6ORD_036
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.2
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 47
Unit IDs
7K52|1|6|G|31
7K52|1|6|C|32
7K52|1|6|U|33
7K52|1|6|C|34
7K52|1|6|A|35
7K52|1|6|U|36
7K52|1|6|A|37
7K52|1|6|A|38
7K52|1|6|C|39
Current chains
- Chain 6
- tRNAfMet
Nearby chains
- Chain 3
- Small subunit ribosomal RNA; SSU rRNA
- Chain 4
- mRNA
- Chain 5
- Transfer RNA; tRNA
- Chain L
- 30S ribosomal protein S7
- Chain N
- 30S ribosomal protein S9
- Chain P
- 30S ribosomal protein S11
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